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1. Prokaryome Prokaryome Public

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2. Metagenomics-16SRNA-Qiime2 Metagenomics-16SRNA-Qiime2 Public

   Qiime 2, an advanced bioinformatics platform, specializes in analyzing metagenomic data. With a modular plugin architecture, integrated workflows, and visualization tools, Qiime 2 facilitates repro…

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3. GeseqFold GeseqFold Public

   GeseqFold is a software tool devolped to process transcriptomic data and conduct differential gene expression analysis using the ordinary least squares (OLS) regression model.

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5. GenomeScratch GenomeScratch Public

   GenomeScratch is a user-friendly tool designed for generating virtual reference genomes, accompanied by GFF and GTF files. Tailored for testing workflows, it enables users to simulate genomic scena…

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6. TranseqFlow-PE TranseqFlow-PE Public

   Transcriptome upstream analysis pipeline with Nextflow for paired-end reads. It performs quality check with FASTQC and MultiQC, trimming with Trimmomatic, alignment with STAR, and quantification of…

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